A1A775Canonical record
Lipoprotein signal peptidase
lspA · Escherichia coli O1:K1 / APEC · Taxonomy ID 405955
Summary
- Primary accession
- A1A775
- Entry name
LSPA_ECOK1- Gene
- lspA
- Organism
- Escherichia coli O1:K1 / APEC
- Terminal taxonomy ID
- 405955
- Mapped species
- Escherichia coli (562)
- Record type
- Canonical
- Sequence length
- 164 amino acids
Chorus interface prediction
Residue-level probability- 48
- Predicted residues
- 29.3%
- Predicted fraction
- 20
- Contiguous sites
- 10
- Longest site
- 0.893
- Maximum probability
- 0.554184
- Decision threshold
Sequence-wide probability
Raw interface-site probability at every residue.
Probability Predicted site Threshold 0.554184
0.0 · lower probability1.0 · higher probability
MSQSICSTGL
RWLWLVVVVL
IIDLGSKYLI
LQNFALGDTV
PLFPSLNLHY
ARNYGAAFSF
LADSGGWQRW
FFAGIAIGIS
VILAVMMYRS
KATQKLNNIA
YALIIGGALG
NLFDRLWHGF
VVDMIDFYVG
DWHFATFNLA
DTAICVGAAL
IVLEGFLPSK
AKKQ
Contact-cell shades are adjusted for white lettering; the spectrum retains the original scale. Underlined residues are predicted contacts. Hover or focus for exact probabilities.
Experimental structure inspection
Best matching PDBFinding the best experimental PDB structure
Checking accession mappings first, then sequence similarity.
Sequence
164 amino acids1
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSF6061
LADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF120121
VVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ164Prediction provenance
- Method
- Chorus
- Atlas release
- Chorus DB release 1
- Release ID
2026_08_30_cross_plm_x6_headline_v1- Source run
2026_08_30_uniprot_reviewed_tm_helical_cross_plm_x6_headline_v1- Inference scope
- Exact-length inference
- Probability encoding
zlib+float64le- Threshold authority
- SI30 validation pooled-residue positive-F1
- Bulk download
- pending
- Sequence SHA-256
2e7c167543c133a4b634a65fd6869f249a6abcae27f9f3d2626cb573d8dd96c7- Probability-vector SHA-256
cd990d021811164d1dcf22d74d19b0f1d910dff93d208096ff56575896c58b20