Chorus DBTM interface-site atlas
Chorus DB/Search result/A1A897
A1A897Canonical record

Protoheme IX farnesyltransferase

cyoE · Escherichia coli O1:K1 / APEC · Taxonomy ID 405955

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Summary

Primary accession
A1A897
Entry name
CYOE_ECOK1
Gene
cyoE
Organism
Escherichia coli O1:K1 / APEC
Terminal taxonomy ID
405955
Mapped species
Escherichia coli (562)
Record type
Canonical
Sequence length
296 amino acids

Chorus interface prediction

Residue-level probability
17
Predicted residues
5.7%
Predicted fraction
10
Contiguous sites
6
Longest site
0.637
Maximum probability
0.554184
Decision threshold

Sequence-wide probability

Raw interface-site probability at every residue.

Probability Predicted site Threshold 0.554184
Probability-colored sequence · residues 1–296 of 296
0.554 threshold
0.0 · lower probability1.0 · higher probability
MIFKQYLQVT
KPGIIFGNLI
SVIGGFLLAS
KGSIDYPLFI
YTLVGVSLVV
ASGCVFNNYI
DRDIDRKMER
TKNRVLVKGL
ISPAVSLVYA
TLLGIAGFML
LWFGANPLAC
WLGVMGFVVY
VGVYSLYMKR
HSVYGTLIGS
LSGAAPPVIG
YCAVTGEFDS
GAAILLAIFS
LWQMPHSYAI
AIFRFKDYQA
ANIPVLPVVK
GISVAKNHIT
LYIIAFAVAT
LMLSLGGYAG
YKYLVVAAAV
SVWWLGMALR
GYKVADDRIW
ARKLFGFSII
AITALSVMMS
VDFMVPDSHT
LLAAVW

Contact-cell shades are adjusted for white lettering; the spectrum retains the original scale. Underlined residues are predicted contacts. Hover or focus for exact probabilities.

Experimental structure inspection

Best matching PDB
Finding the best experimental PDB structure

Checking accession mappings first, then sequence similarity.

Sequence

296 amino acids
1MIFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYI60
61DRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVY120
121VGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAI180
181AIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAV240
241SVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW296

Prediction provenance

Method
Chorus
Atlas release
Chorus DB release 1
Release ID
2026_08_30_cross_plm_x6_headline_v1
Source run
2026_08_30_uniprot_reviewed_tm_helical_cross_plm_x6_headline_v1
Inference scope
Exact-length inference
Probability encoding
zlib+float64le
Threshold authority
SI30 validation pooled-residue positive-F1
Bulk download
pending
Sequence SHA-256
6f203716a47f4489c0b3247239afc6259d56442141fd363b9fc8049755aa2c72
Probability-vector SHA-256
e539bc4c4de58b7c3bd05b7be7358f714ff589f0487c6f773534b80f58a38f4a